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smithlabcode
falco
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IUPAC symbols for orig-dups mode: non-ACGT (case insensitive) are converted to N
System tests on macOS
#152:
Pull request
#147
opened by
andrewdavidsmith
2m 8s
fix-iupac-issue-for-orig-dups
fix-iupac-issue-for-orig-dups
2m 8s
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IUPAC symbols for orig-dups mode: non-ACGT (case insensitive) are converted to N
System tests on Linux
#153:
Pull request
#147
opened by
andrewdavidsmith
1m 20s
fix-iupac-issue-for-orig-dups
fix-iupac-issue-for-orig-dups
1m 20s
View #147
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Grade adapter, overrepresented, N content and duplication as FastQC
System tests on Linux
#152:
Pull request
#146
opened by
MaximilianStammnitz
Action required
MaximilianStammnitz:fix-grading-units
MaximilianStammnitz:fix-grading-units
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Grade adapter, overrepresented, N content and duplication as FastQC
System tests on macOS
#151:
Pull request
#146
opened by
MaximilianStammnitz
Action required
MaximilianStammnitz:fix-grading-units
MaximilianStammnitz:fix-grading-units
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Make binary (macOS)
Make binary (macOS)
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13m 4s
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Make binary (Linux)
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src/fastq_bgzf_file.cpp: fixing macos compiler complaint about type w…
System tests on Linux
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src/fastq_bgzf_file.cpp: fixing macos compiler complaint about type w…
System tests on macOS
#150:
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Fixing bug in decompressing some BGZF files and reporting actual buffer sizes in verbose output
System tests on Linux
#150:
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#143
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1m 24s
fix-bgzf-crash
fix-bgzf-crash
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Fixing bug in decompressing some BGZF files and reporting actual buffer sizes in verbose output
System tests on macOS
#149:
Pull request
#143
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1m 52s
fix-bgzf-crash
fix-bgzf-crash
1m 52s
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Fixing bug in decompressing some BGZF files and reporting actual buffer sizes in verbose output
System tests on macOS
#148:
Pull request
#143
opened by
andrewdavidsmith
1m 2s
fix-bgzf-crash
fix-bgzf-crash
1m 2s
View #143
View workflow file
Fixing bug in decompressing some BGZF files and reporting actual buffer sizes in verbose output
System tests on Linux
#149:
Pull request
#143
opened by
andrewdavidsmith
1m 21s
fix-bgzf-crash
fix-bgzf-crash
1m 21s
View #143
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src/fastq_file.cpp: apparently fcntl.h is needed on systems besides m…
System tests on Linux
#148:
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1m 13s
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src/fastq_file.cpp: apparently fcntl.h is needed on systems besides m…
System tests on macOS
#147:
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2m 1s
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2m 1s
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Adding robustness to IUPAC degenerate nucleotides in reads
System tests on macOS
#146:
Pull request
#142
opened by
andrewdavidsmith
2m 13s
robustness-to-iupac-degen
robustness-to-iupac-degen
2m 13s
View #142
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Adding robustness to IUPAC degenerate nucleotides in reads
System tests on Linux
#147:
Pull request
#142
opened by
andrewdavidsmith
1m 18s
robustness-to-iupac-degen
robustness-to-iupac-degen
1m 18s
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System tests on Linux
System tests on Linux
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1m 11s
robustness-to-iupac-degen
robustness-to-iupac-degen
1m 11s
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System tests on macOS
System tests on macOS
#145:
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1m 51s
robustness-to-iupac-degen
robustness-to-iupac-degen
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Make binary (Linux)
Make binary (Linux)
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2m 43s
robustness-to-iupac-degen
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12m 55s
robustness-to-iupac-degen
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25m 50s
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2m 41s
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data/test_data/md5sum.txt: adding test hash for original gc content test
System tests on Linux
#144:
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54af0b2
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1m 12s
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1m 12s
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data/test_data/md5sum.txt: adding test hash for original gc content test
System tests on macOS
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3m 6s
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3m 6s
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Mode to output GC content using original FastQC smoothing
System tests on Linux
#143:
Pull request
#140
opened by
andrewdavidsmith
1m 1s
gc-content-grade
gc-content-grade
1m 1s
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