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Merged
man4ish merged 1 commit into from
Aug 8, 2026
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docs: add missing tool, correct coverage claim #3

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6 changes: 4 additions & 2 deletions README.md
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Original file line number Diff line number Diff line change
Expand Up @@ -45,6 +45,7 @@ This contract matches the expectations of
* Tools:

* `enrichr_pathway` — Pathway enrichment via Enrichr (REST, multipart-safe)
* `david_annotation` — Functional annotation via DAVID (REST)
* Execution model:

* Stateless REST calls
Expand Down Expand Up @@ -155,7 +156,8 @@ No changes are required in TES beyond refreshing server capabilities.
cd ~/Desktop/machine/omnibioai-toolserver
pytest tests/ -v --cov=.

# 100% coverage
# 97% coverage (verified 2026-08-07; every toolserver/ module itself is
# 100%, setup.py is the only file dragging the --cov=. total down)
```

---
Expand Down Expand Up @@ -192,6 +194,6 @@ pytest tests/ -v --cov=.
| TES HttpToolServerAdapter integration | ✓ Stable |
| Health endpoint | ✓ Stable |
| REST tool lifecycle (submit/poll/results) | ✓ Stable |
| Test coverage | ✓ 100% |
| Test coverage | ✓ 97% (100% within `toolserver/` itself) |
| Docker Compose deployment | ✓ Stable |

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