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19 changes: 18 additions & 1 deletion site/cds_rdm/inspire_harvester/transform/mappers/identifiers.py
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@

from flask import current_app
from idutils.normalizers import normalize_isbn, normalize_urn
from idutils.validators import is_doi, is_urn
from idutils.validators import is_doi, is_url, is_urn

from cds_rdm import schemes
from cds_rdm.inspire_harvester.transform.mappers.mapper import MapperBase
Expand Down Expand Up @@ -342,6 +342,23 @@ def map_value(self, src_record, ctx, logger):
}
)

# External links from INSPIRE (e.g. university repository pages).
for url_entry in src_metadata.get("urls", []):
value = url_entry.get("value") if isinstance(url_entry, dict) else None
if not value:
continue
if not is_url(value):
ctx.errors.append(f"Invalid URL. | details: value={value}")
continue
identifiers.append(
{
"scheme": "url",
"identifier": value,
"relation_type": {"id": "references"},
"resource_type": {"id": ctx.resource_type.value},
}
)

has_cds_doi = any(
d.get("value", "").startswith(current_app.config["DATACITE_PREFIX"])
for d in src_metadata.get("dois", [])
Expand Down
10 changes: 10 additions & 0 deletions site/tests/conftest.py
Original file line number Diff line number Diff line change
Expand Up @@ -1573,6 +1573,16 @@ def relation_type_v(app, relation_type):
},
)

vocab = vocabulary_service.create(
system_identity,
{
"id": "references",
"props": {"datacite": "References"},
"title": {"en": "References"},
"type": "relationtypes",
},
)

vocab = vocabulary_service.create(
system_identity,
{
Expand Down
88 changes: 88 additions & 0 deletions site/tests/inspire_harvester/test_harvester_job.py
Original file line number Diff line number Diff line change
Expand Up @@ -79,6 +79,23 @@
"publication_date": "2024",
"languages": [{"id": "eng", "title": {"en": "English", "da": "Engelsk"}}],
"related_identifiers": [
{
"identifier": "https://wigner.hu/~vertesi/publ/24-PhD-Thesis-VargaZ.pdf",
"relation_type": {
"id": "references",
"title": {
"en": "References",
},
},
"resource_type": {
"id": "publication-dissertation",
"title": {
"de": "Abschlussarbeit",
"en": "Thesis",
},
},
"scheme": "url",
},
{
"identifier": "2840463",
"relation_type": {
Expand Down Expand Up @@ -213,6 +230,40 @@
},
"scheme": "cdsrn",
},
{
"identifier": "https://tel.archives-ouvertes.fr/tel-01155127/",
"relation_type": {
"id": "references",
"title": {
"en": "References",
},
},
"resource_type": {
"id": "publication-dissertation",
"title": {
"de": "Abschlussarbeit",
"en": "Thesis",
},
},
"scheme": "url",
},
{
"identifier": "https://tel.archives-ouvertes.fr/tel-01155127",
"relation_type": {
"id": "references",
"title": {
"en": "References",
},
},
"resource_type": {
"id": "publication-dissertation",
"title": {
"de": "Abschlussarbeit",
"en": "Thesis",
},
},
"scheme": "url",
},
{
"identifier": "1452604",
"relation_type": {
Expand Down Expand Up @@ -289,6 +340,43 @@
"publication_date": "2024-05",
"languages": [{"id": "spa", "title": {"en": "Spanish"}}],
"related_identifiers": [
{
"identifier": (
"https://www.ifisica.uaslp.mx/~jurgen/"
"AkbarEmmanuelDiazRodarte-Lic.pdf"
),
"relation_type": {
"id": "references",
"title": {
"en": "References",
},
},
"resource_type": {
"id": "publication-dissertation",
"title": {
"de": "Abschlussarbeit",
"en": "Thesis",
},
},
"scheme": "url",
},
{
"identifier": "https://www.ifisica.uaslp.mx/~jurgen/Theses.html",
"relation_type": {
"id": "references",
"title": {
"en": "References",
},
},
"resource_type": {
"id": "publication-dissertation",
"title": {
"de": "Abschlussarbeit",
"en": "Thesis",
},
},
"scheme": "url",
},
{
"identifier": "2802969",
"relation_type": {
Expand Down
69 changes: 69 additions & 0 deletions site/tests/inspire_harvester/test_transformer.py
Original file line number Diff line number Diff line change
Expand Up @@ -138,6 +138,75 @@ def test_transform_related_identifiers_skips_invalid_urn(running_app):
assert f"Invalid URN. | details: value={raw}" in ctx.errors


def test_transform_related_identifiers_maps_inspire_urls(running_app):
"""INSPIRE metadata.urls become related identifiers with scheme url."""
src_record = {
"metadata": {
"urls": [
{
"value": (
"https://tesidottorato.depositolegale.it/"
"handle/20.500.14242/121964"
)
},
{"value": "https://iris.unife.it/handle/11392/2549512"},
{"value": "not-a-url"},
{"value": ""},
{},
],
},
"created": "2023-01-01",
}
ctx = MetadataSerializationContext(
resource_type=ResourceType.THESIS, inspire_id="2808071"
)
logger = Logger(inspire_id="2808071")

result = RelatedIdentifiersMapper().map_value(src_record, ctx, logger)

assert {
"scheme": "url",
"identifier": (
"https://tesidottorato.depositolegale.it/handle/20.500.14242/121964"
),
"relation_type": {"id": "references"},
"resource_type": {"id": "publication-dissertation"},
} in result
assert {
"scheme": "url",
"identifier": "https://iris.unife.it/handle/11392/2549512",
"relation_type": {"id": "references"},
"resource_type": {"id": "publication-dissertation"},
} in result
assert not any(item.get("identifier") == "not-a-url" for item in result)
assert "Invalid URL. | details: value=not-a-url" in ctx.errors


def test_transform_related_identifiers_dedupes_urls(running_app):
"""Duplicate INSPIRE urls are mapped once."""
url = "https://example.org/thesis"
src_record = {
"metadata": {"urls": [{"value": url}, {"value": url}]},
"created": "2023-01-01",
}
ctx = MetadataSerializationContext(
resource_type=ResourceType.OTHER, inspire_id="1"
)
logger = Logger(inspire_id="1")

result = RelatedIdentifiersMapper().map_value(src_record, ctx, logger)

url_items = [item for item in result if item.get("scheme") == "url"]
assert url_items == [
{
"scheme": "url",
"identifier": url,
"relation_type": {"id": "references"},
"resource_type": {"id": "publication-other"},
}
]


def test_transform_identifiers(running_app):
"""Test IdentifiersMapper."""
src_metadata = {
Expand Down
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