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Dar-kSun / smfish-imaging

Counting mRNA clusters and single molecules in smFISH microscopy images. Two pipelines (STED clustering, confocal copy-number calibration), validated against synthetic ground truth.

python single-molecule image-analysis fluorescence microscopy cell-biology bioimage-analysis sted smfish

Updated Nov 1, 2026
Python

gaievskyi / sted

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Text prettifier for the "Introduction to programming" lecture.

python computer-science formatter programming beautifier text-editor sted text-beautifier

Updated Jan 31, 2022
Python

antoinebaudrimont-beep / sted_synaptonemal_complex_spacing

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R scripts to quantify STED synaptonemal complex spacing using intensity profiles and two-Gaussian peak fitting.

r image-analysis microscopy meiosis sted synaptonemal-complex

Updated Jun 2, 2026
R

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