Scalable summary statistics tool to find sampled and ghost introgression from gene trees.
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Oct 30, 2026 - Python
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introgression-tests
Here are 4 public repositories matching this topic...
Archived code for analyses in "Extensive phylogenomic discordance and the complex evolutionary history of the Neotropical cat genus Leopardus" (Lescroart et al. 2023, MBE)
quality-control snakemake ils phylogenomics genome-analysis demographic-analysis diversity-measurement ngs-pipeline genealogical-trees introgression-tests leopardus
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Nov 28, 2023 - Python
Script for detecting signals of introgression in large set of gene trees from unlinked markers
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Nov 25, 2020 - R
Discordant attachment frequency tool
phylogenetics phylogenetic-networks phylogenomics coalescence introgression introgression-tests multispecies-coalescent
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Oct 21, 2026 - Python
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