Machine-learning exploration of the All Autoimmune Disorder 10k dataset: data download/cleaning package plus EDA and feature-engineering notebooks.
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Updated
Oct 19, 2026 - Jupyter Notebook
Machine-learning exploration of the All Autoimmune Disorder 10k dataset: data download/cleaning package plus EDA and feature-engineering notebooks.
MAKAAO knowledge graph of autoantibodies and autoimmune diseases
Analysis code used for Rabadam G, Neely J, et al. JCI Insight, 2024.
MAKAAO website for autoantibodies and autoimmune diseases
A collection of summaries and reflective notes from immunology courses, including innate and adaptive immunity, autoimmunity, infectious diseases, cancer immunology and immune system failures.
Reproducible computational framework for cross-species therapeutic target discovery in lupus nephritis integrating human single-cell RNA-seq, mouse validation, and spatial transcriptomics.
Differential presentation analysis of T cell epitopes associated with autoimmunity
Single-cell RNA-seq analysis of Sjögren’s syndrome revealing T-cell state remodeling using dual pipelines (Seurat & Scanpy).
Reproducibility repository for a single-cell analysis of cardiac ion-channel expression across cell type and development, relevant to anti-Ro/SSA congenital heart block.
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