Project STEEP DMAC workshop materials.
Recording from the latest Data&Donuts workshops are on our youtube channel.
- agenda (agenda.pdf)
- slides for introduction, data handling, data publications, best practices with excel and jupyter notebook example (overview_handling_publications_excel_jupyter.pdf)
- slides about nice example from Justin Sankey (file_handling_justin.pdf)
- slides about Harvard dataverse and nice examples from Jahred Liddie (dataverse_jml.pdf)
- slides about study design and statistical analysis from Marie-Abele Bind (study_design_and_statistical_analysis.pdf)
- directory including data and code for the jupyter notebook tutorial (jupyter_example):
- contaminants_in_fish.ipynb (hands on example)
- contaminants_in_fish_solutions.ipynb (hands on example with solutions)
- GLENDA_PFAS_IN_FISH.csv (input data in csv format)
- GLENDA_PFAS_IN_FISH.xlsx (input data in xlsx format)
- agenda (agenda.pdf)
- abstract and bio from Rance Nault's seminar (abstract_bio_rance_nault.pdf)
- slides from discussion session (slides_intro.pdf)
- slides from Olga's presentation on research data management (research_data_olga.pdf)
- slides from Rance Nault's seminar (slides_rance_nault.pdf)
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agenda (agenda.pdf)
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slides from all sessions (Slides.pdf)
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example:
- instructions for hands-on example (PCA_PFAS_Worksheet.pdf)
- example data for hands-on example (water_grab_samples_matt_dunn_cape_cod.csv)
- solution code for hands-on example in R(pfas_pca_workshop.R)
- solution code for hands-on example in Python/Jupyter Notebook (pfas_pca_workshop.ipynb)
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agenda (agenda.pdf)
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slides from all sessions:
- DMAC_introduction.pdf
- data_sharing_requirements.pdf
- biostatistics_confidence_intervals.pdf