Feature/extractumi - #21

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buehlere wants to merge 87 commits into

feature/extractumi

Commits on Apr 13, 2023

adding mskcc modules
buehlere
committed
a5af10e
adding test yaml for mskccprepnucleo
EricWilliam Buehler
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9edde93

Commits on Apr 20, 2023

name change
EricWilliam Buehler
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f07a6de
removing redundant channel
EricWilliam Buehler
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043bec3

Commits on Apr 27, 2023

re-doing first access subworkflow
EricWilliam Buehler
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a830c37

Commits on May 2, 2023

clean up old workflow, after re-name
EricWilliam Buehler
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6503b00

Commits on May 9, 2023

try fork syncing
EricWilliam Buehler
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db72d2c
Merge branch 'develop' into feature/extractumi
buehlere
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00fa7d7
experimenting with auto sync
EricWilliam Buehler
committed
fc28f6e
Merge branch 'feature/extractumi' of https://github.com/mskcc-omics-workflows/modules into feature/extractumi
EricWilliam Buehler
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d669e02
testing gitactions
EricWilliam Buehler
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7c9816d
gitactions test
EricWilliam Buehler
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228c772
Merge pull request #4 from nf-core/master
buehlere
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2d70a15
gitactions experiment
EricWilliam Buehler
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d612e60
Merge branch 'feature/extractumi' of https://github.com/mskcc-omics-workflows/modules into feature/extractumi
EricWilliam Buehler
committed
fde2b5d
trying to fix gitactions
EricWilliam Buehler
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a78e7ea
Create sync-fork.yml
buehlere
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06b27e0
Update sync-fork.yml
buehlere
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f2c759d
Update sync-fork.yml
buehlere
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7ff8837
Update sync-fork.yml
buehlere
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03ede3c
Merge branch 'master' of https://github.com/mskcc-omics-workflows/modules
buehlere
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37ad4bd
Update sync-fork.yml
buehlere
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879199a
Update sync-fork.yml
buehlere
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c21e35b
Update sync-fork.yml
buehlere
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cd09579
Update sync-fork.yml
buehlere
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31331e4
Merge branch 'master' into feature/extractumi
buehlere
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cf56e9b
remove output folders
buehlere
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9a1f635

Commits on May 10, 2023

Update sync-fork.yml
buehlere
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be48046
Revert "Update sync-fork.yml"
buehlere
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caa71e9
Create sync-action.yml
buehlere
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e0c8587
Merge pull request #10 from nf-core/master
buehlere
authored
0877f99

Commits on May 12, 2023

Merge pull request #11 from nf-core/master
buehlere
authored
6b5a9c2

Commits on May 13, 2023

Merge pull request #12 from nf-core/master
buehlere
authored
d65303a

Commits on May 15, 2023

Merge pull request #13 from nf-core/master
buehlere
authored
ff7519d

Commits on May 16, 2023

Merge pull request #14 from nf-core/master
buehlere
authored
ff6690a

Commits on May 17, 2023

Merge pull request #15 from nf-core/master
buehlere
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37ceaf0
remove this for separate PR
buehlere
committed
441d2d9
Merge branch 'master' into feature/extractumi
buehlere
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95ef62c
clean up for extractumi
EricWilliam Buehler
committed
eaef95a
Merge branch 'master' into develop
buehlere
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4c663a3
Update sync-action.yml
buehlere
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7215646
Delete sync-fork.yml
buehlere
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ab7ba98
Merge pull request #16 from nf-core/master
buehlere
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13d45de
Merge branch 'develop' into feature/extractumi
buehlere
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12be703
Update sync-action.yml
buehlere
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35baf68
Update sync-action.yml
buehlere
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f2f4e04
Revert "Merge pull request #16 from nf-core/master"
buehlere
committed
5912f29

Commits on May 18, 2023

Merge pull request #17 from nf-core/master
buehlere
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668223d
Update sync-action.yml
buehlere
committed
d3d728d
Merge pull request #20 from nf-core/master
buehlere
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1b166e5
Merge branch 'develop' into feature/extractumi
buehlere
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4b5b4ba
cleanup
EricWilliam Buehler
committed
e49802d

Commits on May 22, 2023

Merge pull request #23 from nf-core/master
buehlere
authored
98ecd46

Commits on May 23, 2023

Merge pull request #25 from nf-core/master
buehlere
authored
e3e34fa

Commits on May 24, 2023

Merge pull request #27 from nf-core/master
buehlere
authored
a49348f

Commits on May 25, 2023

Commits on May 26, 2023

Commits on May 27, 2023

Merge pull request #34 from nf-core/master
buehlere
authored
2c128f2

Commits on May 30, 2023

Merge pull request #36 from nf-core/master
buehlere
authored
2d80a5a

Commits on May 31, 2023

Merge pull request #38 from nf-core/master
buehlere
authored
c7e7c4e

Commits on Jun 1, 2023

Merge pull request #40 from nf-core/master
buehlere
authored
8485cc7

Commits on Jun 2, 2023

Merge pull request #42 from nf-core/master
buehlere
authored
365d9eb

Commits on Jun 3, 2023

Merge pull request #44 from nf-core/master
buehlere
authored
320b705

Commits on Jun 5, 2023

Merge pull request #46 from nf-core/master
buehlere
authored
0b85cd9

Commits on Jun 6, 2023

Merge pull request #48 from nf-core/master
buehlere
authored
84aa571

Commits on Jun 8, 2023

Merge pull request #50 from nf-core/master
buehlere
authored
ea666e8
Merge pull request #30 from mskcc-omics-workflows/enhancement/run_workflows_develop
buehlere
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c1b05ee
Merge branch 'develop' into feature/extractumi
buehlere
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b82a132
prettier formatting
buehlere
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e32f380
fix formatting for linters
buehlere
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c588273
removing tools-test-dataset
buehlere
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601c863
re-doing md5 sum
EricWilliam Buehler
committed
a3ae978
Update test.yml
buehlere
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10d52c3
redoing md5sums
EricWilliam Buehler
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a804e7c

Commits on Jun 9, 2023

Update main.nf
buehlere
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ad64d4c

Commits on Aug 8, 2023

Merge branch 'develop' into feature/extractumi
buehlere
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e8724f1
Delete sync-action.yml
buehlere
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73fedb5
Merge branch 'develop' into feature/extractumi
buehlere
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1902b7f
remove poorly synced files
buehlere
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0b5ff75
more poorly synced cleanup
buehlere
committed
053d201

Commits on Aug 9, 2023

name change
EricWilliam Buehler
committed
75a0cfe
removing old name workflow
EricWilliam Buehler
committed
ac38f09
Update pytest_modules.yml
buehlere
committed
d867082