Issues

• Align ODE dependencies (Commons Math 2.x vs. 3.x)

  on hold
  draeger-lab/SBSCL#92 · Filter by author xts-Michi opened on Aug 26, 2025
  2

• Raise Java baseline & ensure FBA runs cleanly on Java 22 (deprecate Java 8)

  on hold
  draeger-lab/SBSCL#91 · Filter by author xts-Michi opened on Aug 21, 2025
  4

• LSODAIntegrator.java is not follow Java conventions.

  draeger-lab/SBSCL#79 · Filter by author tyzerrr opened on Apr 6, 2025
  6

• Migrate from Maven to Gradle

  enhancementmaven
  Task

  draeger-lab/SBSCL#77 · Filter by author tyzerrr opened on Apr 1, 2025
  3

  

• Introduce linters to protect and maintain code quality.

  enhancementmaven
  Task

  draeger-lab/SBSCL#76 · Filter by author tyzerrr opened on Apr 1, 2025
  6

  

• download_bigg_models.sh throws ERROR 404

  draeger-lab/SBSCL#73 · Filter by author funasoul opened on Jul 7, 2023
  2

• Exchangable solvers

  enhancementin progress
  draeger-lab/SBSCL#71 · Filter by author draeger opened on Jan 7, 2023
  4

  

• Improve the curation level on BioSimulators

  enhancement
  draeger-lab/SBSCL#68 · Filter by author draeger opened on Apr 4, 2022
  2

• Refactor FERN classes to use SBSCL classes

  enhancementstochastic-simulation
  Task

  draeger-lab/SBSCL#55 · Filter by author hemilpanchiwala opened on Aug 6, 2020
  2

  

• Support for FBA FROG analysis

  enhancementsbml-fbc
  Feature

  draeger-lab/SBSCL#49 · Filter by author matthiaskoenig opened on Jun 22, 2020
  1

  

• Add delay property to the rateOf function

  gsocSBML-l3v2
  Feature

  draeger-lab/SBSCL#46 · Filter by author hemilpanchiwala opened on Jun 16, 2020
  2

  

• Misinterpretation of function variables with parameters

  buggsocsbml
  draeger-lab/SBSCL#45 · Filter by author hemilpanchiwala opened on Jun 16, 2020
  6

  

• Event triggers before the mentioned condition

  buggsocsbml
  Bug

  draeger-lab/SBSCL#44 · Filter by author hemilpanchiwala opened on Jun 14, 2020
  5

  

• SBML TestSuite semantic/01592 takes 15-25 minutes to run

  enhancementhelp wantedstochastic-simulation
  Task

  draeger-lab/SBSCL#39 · Filter by author matthiaskoenig opened on May 23, 2020
  11

  

• Some comp tests are failing due to JSBML flattening

  bugpre-gsoc
  Bug

  draeger-lab/SBSCL#36 · Filter by author matthiaskoenig opened on May 19, 2020
  6

  

• LPsolver not working on ubuntu linux (libglpkjni_x64.so: undefined symbol: lib_set_fault_hook)

  planatscherscpsolverwontfix
  draeger-lab/SBSCL#5 · Filter by author shalinshah1993 opened on Aug 6, 2018
  16

• Add support for nested repeated tasks

  enhancementhelp wanted
  draeger-lab/SBSCL#3 · Filter by author shalinshah1993 opened on Aug 6, 2018