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UMMS-Biocore

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Repositories

Showing 10 of 54 repositories
  • foundry-mcp Public

    ViaFoundry MCP server — UMMS fork (submodule of UMMS-Biocore/viafoundry)

    UMMS-Biocore/foundry-mcp's past year of commit activity
    Python 0 Apache-2.0 0 2 0 Updated Nov 9, 2026
  • foundry-connect-plugin Public
    UMMS-Biocore/foundry-connect-plugin's past year of commit activity
    JavaScript 0 Apache-2.0 0 0 0 Updated Nov 7, 2026
  • foundry-sdk Public

    ViaFoundry Python SDK — UMMS fork (dependency of viafoundry-mcp)

    UMMS-Biocore/foundry-sdk's past year of commit activity
    Python 0 0 1 0 Updated Nov 4, 2026
  • fc-deploy Public
    UMMS-Biocore/fc-deploy's past year of commit activity
    0 0 0 0 Updated Nov 1, 2026
  • ai-for-bioinformatics-bootcamp Public

    Hands-on AI for Bioinformatics bootcamp. Theory plus responsible AI plus Foundry Connect, anchored on Garber lab studies (bulk RNA-Seq, single-cell, spatial).

    UMMS-Biocore/ai-for-bioinformatics-bootcamp's past year of commit activity
    HTML 1 0 0 3 Updated Oct 26, 2026
  • foundry-connect-pipeline-fixture-1 Public

    Single use fixture for the Foundry Connect pipeline git modules proof (git-3-3)

    UMMS-Biocore/foundry-connect-pipeline-fixture-1's past year of commit activity
    Nextflow 0 0 0 0 Updated Oct 24, 2026
  • bootcamp-bulk-rnaseq Public Forked from mgarber/bootcamp-bulk-rnaseq

    Bootcamp session 4: why bulk RNA-seq DE uses models (marimo notebook)

    UMMS-Biocore/bootcamp-bulk-rnaseq's past year of commit activity
    Python 0 1 0 0 Updated Oct 9, 2026
  • foundry-R-sdk Public

    R SDK for the Foundry Connect API

    UMMS-Biocore/foundry-R-sdk's past year of commit activity
    R 0 0 0 0 Updated Oct 9, 2026
  • ired-88-research-copilot Public Forked from ericmjl/ired-88-research-copilot

    Live demo for the UMass Chan 'AI as a Research Co-Pilot' course: one enzyme, four data modalities, one question ladder

    UMMS-Biocore/ired-88-research-copilot's past year of commit activity
    Python 0 1 0 0 Updated Oct 2, 2026
  • fu-multiomics-explorer Public
    UMMS-Biocore/fu-multiomics-explorer's past year of commit activity
    HTML 1 MIT 0 0 0 Updated Oct 2, 2026
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