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fix(contigs): guard the out-of-bounds ploidy read and the supercluster-merge null deref (#250) Tests #279: Pull request #251 synchronize by TimD1
1m 8s 250_td_guard-ctg-oob
250_td_guard-ctg-oob
1m 8s
feat(variant): retain source records and carry their columns via htslib (#248) Tests #278: Pull request #252 synchronize by TimD1
59s 248_td_keep-source-records
248_td_keep-source-records
59s
feat(variant): retain source records and carry their columns via htslib (#248) Tests #277: Pull request #252 opened by TimD1-bot
1m 0s 248_td_keep-source-records
248_td_keep-source-records
1m 0s
fix(contigs): guard the out-of-bounds ploidy read and the supercluster-merge null deref (#250) Tests #276: Pull request #251 synchronize by TimD1
1m 9s 250_td_guard-ctg-oob
250_td_guard-ctg-oob
1m 9s
fix(contigs): guard the out-of-bounds ploidy read and the supercluster-merge null deref (#250) Tests #275: Pull request #251 synchronize by TimD1
1m 13s 250_td_guard-ctg-oob
250_td_guard-ctg-oob
1m 13s
fix(contigs): guard the out-of-bounds ploidy read and the supercluster-merge null deref (#250) Tests #274: Pull request #251 opened by TimD1-bot
1m 12s 250_td_guard-ctg-oob
250_td_guard-ctg-oob
1m 12s
refactor(bed)!: stop pruning contigs and reference sequence in intersect_contigs (#246) Tests #273: Pull request #247 synchronize by TimD1
1m 20s 246_td_remove-ctg-pruning
246_td_remove-ctg-pruning
1m 20s
feat(variant): add the match-tier criterion enums and ladder (#193) (… Tests #272: Commit dfb5490 pushed by TimD1
57s dev
dev
57s
refactor(bed)!: stop pruning contigs and reference sequence in intersect_contigs (#246) Tests #271: Pull request #247 opened by TimD1-bot
1m 5s 246_td_remove-ctg-pruning
246_td_remove-ctg-pruning
1m 5s
feat(variant): add the match-tier criterion enums and ladder (#193) Tests #270: Pull request #245 synchronize by TimD1
55s 193_td_add-match-tiers
193_td_add-match-tiers
55s
feat(variant): add the match-tier criterion enums and ladder (#193) Tests #269: Pull request #245 synchronize by TimD1
1m 17s 193_td_add-match-tiers
193_td_add-match-tiers
1m 17s
feat(variant): add the match-tier criterion enums and ladder (#193) Tests #268: Pull request #245 opened by TimD1-bot
58s 193_td_add-match-tiers
193_td_add-match-tiers
58s
feat(cli): add -st/--stratification manifest loading and validation (… Tests #267: Commit f3a43e4 pushed by TimD1
1m 7s dev
dev
1m 7s
feat(cli): add -st/--stratification manifest loading and validation (#234) Tests #266: Pull request #244 synchronize by TimD1-bot
1m 1s 234_td_stratify-manifest
234_td_stratify-manifest
1m 1s
feat(cli): add -st/--stratification manifest loading and validation (#234) Tests #265: Pull request #244 synchronize by TimD1-bot
1m 2s 234_td_stratify-manifest
234_td_stratify-manifest
1m 2s
refactor(bed): extract classify(), add merge(), and drop the bed_exis… Tests #264: Commit 3cfd72e pushed by TimD1
1m 2s dev
dev
1m 2s
refactor(bed): extract classify(), add merge(), and drop the bed_exists guard (#231) Tests #263: Pull request #241 synchronize by TimD1-bot
1m 11s 231_td_bed-helper-fns
231_td_bed-helper-fns
1m 11s
feat(cli)!: rename -s to -sc for --max-supercluster-size (#233) (#243) Tests #262: Commit faf2ace pushed by TimD1
1m 20s dev
dev
1m 20s
feat(cli)!: rename -s to -sc for --max-supercluster-size (#233) Tests #261: Pull request #243 synchronize by TimD1
1m 6s 233_td_sc-cli
233_td_sc-cli
1m 6s
fix(variant): error on a coordinate-unsorted input VCF (#232) (#242) Tests #260: Commit 6780c48 pushed by TimD1
1m 3s dev
dev
1m 3s
fix(variant): error on a coordinate-unsorted input VCF (#232) Tests #259: Pull request #242 synchronize by TimD1-bot
1m 2s 232_td_error-unsorted-vcf
232_td_error-unsorted-vcf
1m 2s
refactor(bed): extract classify(), add merge(), and drop the bed_exists guard (#231) Tests #258: Pull request #241 synchronize by TimD1-bot
1m 13s 231_td_bed-helper-fns
231_td_bed-helper-fns
1m 13s
fix(bed): read BED files through htslib so gzip and bgzip work (#230)… Tests #257: Commit 62b7859 pushed by TimD1
1m 6s dev
dev
1m 6s
feat(variant): retain source ID/QUAL/FILTER/INFO/FORMAT on the summary VCF (#104) Tests #256: Pull request #209 synchronize by TimD1-bot
1m 5s 104_td_keep-id-qual-filter-info-format
104_td_keep-id-qual-filter-info-format
1m 5s
feat(variant): retain source ID/QUAL/FILTER/INFO/FORMAT on the summary VCF (#104) Tests #255: Pull request #209 synchronize by TimD1
1m 2s 104_td_keep-id-qual-filter-info-format
104_td_keep-id-qual-filter-info-format
1m 2s