Fix workflow tests that are failing - #410

Merged

woodsh17 merged 22 commits into

mainfrom

fix_test_diffusion

Nov 13, 2025

Commits on Oct 10, 2025

Address 'command' referenced before assignment error in tests
woodsh17
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a18f996
Adjusting command format for design_macrocyclic_binder.sh and design_macrocyclic_monomer.sh
woodsh17
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2d15730
Fail tests when example scripts exit non-zero
woodsh17
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a45c3f9
Changing number of designs for examples from 10 to 2 to speed up tests
woodsh17
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f43a81d
Fix input_pdb path in design_macrocyclic_binder and fix incorrect call to res in test_diffusion.py
woodsh17
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778f8d4

Commits on Oct 14, 2025

Add print statement to list failed examples
woodsh17
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a9b748b

Commits on Oct 20, 2025

Edits to test_diffusion to make change setUp to setUpClass to make this a class method so examples run only once
woodsh17
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260692d

Commits on Oct 21, 2025

Commits on Oct 22, 2025

Commits on Oct 23, 2025

Change design_nickel.sh num_designs back to 15
woodsh17
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4aea4fd

Commits on Oct 24, 2025

Remove try block with except FileExistsError that isn't needed
woodsh17
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ead721f

Commits on Nov 12, 2025

Revert "Remove try block with except FileExistsError that isn't needed"
woodsh17
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dd7643d