Tighten birth and conception entry and drop legacy nbri_ehr tables - #20
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labkey-martyp wants to merge 3 commits into
Open
Tighten birth and conception entry and drop legacy nbri_ehr tables#20labkey-martyp wants to merge 3 commits into
labkey-martyp wants to merge 3 commits into
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Conception is the only table left in the nbri_ehr schema — the rest were carried over from the legacy system and nothing reads them, so their queries, lookups and referencing columns go too. On the entry side, birth condition and conception term date are gone, conception date is now required, and the fields the Start with Conception window populates are read-only.
The birth, arrival and death forms each wrote demographics.birth and demographics.death independently, and the death form also hand-set calculated_status. One trigger helper now derives both dates from the saved event records, and status is left to the shared recalc that owns the death/departure precedence. Adds a drift query for reconciling values the old paths left stale.
Adds a test for deleting a death record, which has to hand the status back to the shared recalc rather than assume the animal is alive, and asserts the birth and death dates reach demographics on the arrival, birth and death forms. The birth and deaths sample data disagreed with demographics on nine rows and now matches, leaving only the animals that legitimately have no birth record.
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Rationale
Tighten what the birth and conception forms accept, and retire the tables the
nbri_ehrschema inherited from the legacy system. The form changes come out of the bulk data entry work: conception term date was never populated, and the birth fields that the Start with Conception window fills could still be edited by hand, which let a birth drift out of sync with the conception it came from. Nothing in the module reads the legacy tables, so they only add noise to the schema browser, the lookup administration page and every future upgrade script.Related Pull Requests
None.
Changes
nbri_ehrschema along with the queries, custom views, lookups and referencing columns that existed only to serve them. Conception is the only table left in the schema.