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mdhumphries merged 2 commits into from
Aug 13, 2026
Merged

Update sources.yaml with new papers and images #46

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Update sources.yaml with new papers and images
mdhumphries Aug 12, 2026
7fcfdb4
Update citations
mdhumphries Aug 13, 2026
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28 changes: 11 additions & 17 deletions _data/citations.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -38,8 +38,15 @@
date: '2026-05-19'
link: https://doi.org/hb4xhx
orcid: 0000-0002-1906-2581
plugin: orcid.py
file: orcid.yaml
plugin: sources.py
file: sources.yaml
image: https://media.springernature.com/full/springer-static/image/art%3A10.1038%2Fs44271-026-00465-0/MediaObjects/44271_2026_465_Fig1_HTML.png?as=webp
tags:
- behaviour
buttons:
- type: source
text: code
link: https://github.com/Humphries-Lab/Foraging-variability
- id: doi:10.64898/2026.02.16.706176
title: Primary and Supplementary Motor cortex implement parallel control solutions
for rhythmic and discrete arm movements
Expand All @@ -53,19 +60,6 @@
orcid: 0000-0002-1906-2581
plugin: orcid.py
file: orcid.yaml
- id: doi:10.1101/2025.10.28.685063
title: Stochastic choice drives variability in patch foraging decisions in humans
and rats
authors:
- Emma V. Scholey
- Matthew A.J. Apps
- Mark D. Humphries
publisher: openRxiv
date: '2025-10-29'
link: https://doi.org/g98xgz
orcid: 0000-0002-1906-2581
plugin: orcid.py
file: orcid.yaml
- id: doi:10.1523/ENEURO.0431-23.2024
title: The Computational Bottleneck of Basal Ganglia Output (and What to Do About
it)
Expand Down Expand Up @@ -155,7 +149,7 @@
orcid: 0000-0002-1906-2581
plugin: sources.py
file: sources.yaml
image: https://www.jneurosci.org/content/jneuro/42/20/4131/F2.medium.gif
image: images/Paper_Figures/Maggi_JNeurosci2022_figure2.jpg
tags:
- prefrontal-cortex
- latent-dynamics
Expand All @@ -171,7 +165,7 @@
orcid: 0000-0002-1906-2581
plugin: sources.py
file: sources.yaml
image: https://www.jneurosci.org/content/jneuro/42/8/1417/F10.medium.gif
image: images/Paper_Figures/Cinotti_JNeurosci2021_figure10.jpg
tags:
- basal-ganglia
- Bayesian
Expand Down
18 changes: 15 additions & 3 deletions _data/sources.yaml
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@@ -1,3 +1,13 @@
# stochastic model foraging paper
- id: doi:10.1038/s44271-026-00465-0
image: https://media.springernature.com/full/springer-static/image/art%3A10.1038%2Fs44271-026-00465-0/MediaObjects/44271_2026_465_Fig1_HTML.png?as=webp
tags:
- behaviour
buttons:
- type: source
text: code
link: https://github.com/Humphries-Lab/Foraging-variability

# computational bottleneck
- id: doi:10.1523/ENEURO.0431-23.2024
image: https://www.eneuro.org/content/eneuro/12/4/ENEURO.0431-23.2024/F2.medium.gif
Expand Down Expand Up @@ -43,14 +53,14 @@

# Activity subspaces in mPfC
- id: doi:10.1523/JNEUROSCI.1412-21.2022
image: https://www.jneurosci.org/content/jneuro/42/20/4131/F2.medium.gif
image: images/Paper_Figures/Maggi_JNeurosci2022_figure2.jpg
tags:
- prefrontal-cortex
- latent-dynamics

# Bayesian inference of connections between neurons
- id: doi:10.1523/jneurosci.1487-21.2021
image: https://www.jneurosci.org/content/jneuro/42/8/1417/F10.medium.gif
image: images/Paper_Figures/Cinotti_JNeurosci2021_figure10.jpg
tags:
- basal-ganglia
- Bayesian
Expand Down Expand Up @@ -209,7 +219,9 @@


# papers to remove from ORCID: bioRxiv versions of published papers

# stochastic foraging model Comm Psych preprint
- id: doi:10.1101/2025.10.28.685063
remove: true

# bottleneck preprint
- id: doi:10.1101/2024.10.23.619790
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