R code used to process and analyze target and non-target LC-MS/MS data acquired from river samples collected from the Neckar and Spree river catchments in Germany.
"Target and nontarget analysis reveal similar dissolved organic contaminant patterns relative to quantified catchment characteristics along two German rivers"
Lana Graves, Christiane Zarfl, Tina Hirsch, Giovanni A. Vitale, Daniel Petras, Stephanie Spahr
R code by Lana Graves, lana.graves at uni-tuebingen.de
Code run in RStudio.
01_Data: Contains files with data that are used for data analysis
02_Output_DataProduct: Destination folder that is created and populated with .csv files when the code is run
03_Output_Figures: Destination folder that is created and populated with .pdf files when the code is run
- Download and unzip folder with the included data subfolder
- Open .R file in RStudio
- Personalize Directory address
- Run entire code - additional subfolders as well as .csv and .pdf files will be generated