ALICE3: TRK and FT3 topology dictionaries per layer, their builder an…

Detectors/Upgrades/ALICE3/TRKFT3/common/CMakeLists.txt

@@ -12,3 +12,4 @@
 add_subdirectory(simulation)
 add_subdirectory(reconstruction)
 add_subdirectory(workflow)
+add_subdirectory(macros)

Detectors/Upgrades/ALICE3/TRKFT3/common/macros/CMakeLists.txt

@@ -0,0 +1,17 @@
+# Copyright 2019-2020 CERN and copyright holders of ALICE O2.
+# See https://alice-o2.web.cern.ch/copyright for details of the copyright holders.
+# All rights not expressly granted are reserved.
+#
+# This software is distributed under the terms of the GNU General Public
+# License v3 (GPL Version 3), copied verbatim in the file "COPYING".
+#
+# In applying this license CERN does not waive the privileges and immunities
+# granted to it by virtue of its status as an Intergovernmental Organization
+# or submit itself to any jurisdiction.
+
+
+o2_add_test_root_macro(CheckTopologyDictionary.C
+                       PUBLIC_LINK_LIBRARIES O2::TRKReconstruction
+                                             O2::DetectorsBase
+                                             O2::SimulationDataFormat
+                       LABELS alice3 COMPILE_ONLY)

Detectors/Upgrades/ALICE3/TRKFT3/common/reconstruction/CMakeLists.txt

@@ -16,6 +16,8 @@ endif()
 o2_add_library(TRKReconstruction
                TARGETVARNAME targetName
                SOURCES src/Clusterer.cxx
+                       src/TopologyDictionary.cxx
+                       src/BuildTopologyDictionary.cxx
                        $<$<BOOL:${Acts_FOUND}>:src/ClustererACTS.cxx>
                PUBLIC_LINK_LIBRARIES
                        Microsoft.GSL::GSL
@@ -30,3 +32,8 @@ o2_add_library(TRKReconstruction
 if(Acts_FOUND)
   target_compile_definitions(${targetName} PUBLIC O2_WITH_ACTS)
 endif()
+
+o2_target_root_dictionary(TRKReconstruction
+                          HEADERS include/TRKReconstruction/TopologyDictionary.h
+                                  include/TRKReconstruction/BuildTopologyDictionary.h
+                          LINKDEF src/TRKReconstructionLinkDef.h)

Detectors/Upgrades/ALICE3/TRKFT3/common/reconstruction/include/TRKReconstruction/BuildTopologyDictionary.h

@@ -0,0 +1,91 @@
+// Copyright 2019-2026 CERN and copyright holders of ALICE O2.
+// See https://alice-o2.web.cern.ch/copyright for details of the copyright holders.
+// All rights not expressly granted are reserved.
+//
+// This software is distributed under the terms of the GNU General Public
+// License v3 (GPL Version 3), copied verbatim in the file "COPYING".
+//
+// In applying this license CERN does not waive the privileges and immunities
+// granted to it by virtue of its status as an Intergovernmental Organization
+// or submit itself to any jurisdiction.
+
+/// \file BuildTopologyDictionary.h
+/// \brief Builds the TRK and FT3 topology dictionaries from MC clusters and their particles' crossings
+///
+/// Each cluster is accounted with its particle's crossing of the chip: the
+/// ends of its path through the silicon. Per layer, build first scans the
+/// depth: the local y, on a grid of depthStep, at which the residuals'
+/// widths across and along, added in quadrature, are smallest. It then cuts
+/// every crossing at that depth: a pattern with at least minCount residuals
+/// gets its own entry; a group takes the widths of its rare patterns, else of
+/// the rare patterns with the same span class on the axis, else of the layer.
+
+#ifndef ALICEO2_TRKFT3_BUILDTOPOLOGYDICTIONARY_H
+#define ALICEO2_TRKFT3_BUILDTOPOLOGYDICTIONARY_H
+
+#include "TRKReconstruction/TopologyDictionary.h"
+#include <cstdint>
+#include <string>
+#include <unordered_map>
+#include <vector>
+
+namespace o2::trkft3
+{
+
+template <int DetID>
+class BuildTopologyDictionary
+{
+ public:
+  using Dictionary = TopologyDictionary<DetID>;
+  using ClusterType = typename Dictionary::ClusterType;
+
+  struct Settings {
+    uint32_t minCount = 137;   ///< residuals for an entry of its own: the width to 10 %
+    float depthStep = 0.5e-4f; ///< [cm]
+    int nThreads = 1;          ///< for the depth scan
+  };
+
+  BuildTopologyDictionary(int nLayers, const Settings& settings);
+
+  /// A cluster and its particle's crossing of the chip, in O2's local frame [cm].
+  void accountCluster(const ClusterType& cluster, const unsigned char* pattern, const math_utils::Point3D<float>& start, const math_utils::Point3D<float>& end);
+
+  /// Builds every layer; throws std::runtime_error for a layer with too few residuals.
+  void build();
+
+  void setApplyOffsets(bool apply) noexcept { mDictionary.setApplyOffsets(apply); }
+  [[nodiscard]] const Dictionary& getDictionary() const noexcept { return mDictionary; }
+  /// Writes the dictionary as "ccdb_object".
+  void saveDictionaryRoot(const std::string& fileName) const;
+
+ private:
+  /// A cluster's crossing relative to its centre of gravity in the layer's flat frame [cm].
+  struct Crossing {
+    uint32_t pattern = 0; ///< index among the layer's patterns
+    float x0 = 0.f;       ///< start - centre of gravity, across
+    float y0 = 0.f;       ///< start, depth
+    float z0 = 0.f;       ///< start - centre of gravity, along
+    float dx = 0.f;       ///< end - start
+    float dy = 0.f;
+    float dz = 0.f;
+  };
+  struct LayerInput {
+    std::unordered_map<std::string, uint32_t> patternIndex; ///< the pattern's bytes -> index
+    std::vector<std::string> patterns;
+    std::vector<Crossing> crossings;
+  };
+
+  [[nodiscard]] float measureDepth(int layer, const LayerInput& input) const;
+  void makeEntries(int layer, const LayerInput& input, LayerDictionary& data) const;
+
+  Settings mSettings;             //!
+  std::vector<LayerInput> mInput; //!
+  Dictionary mDictionary;         //!
+};
+
+using TRKBuildTopologyDictionary = BuildTopologyDictionary<o2::detectors::DetID::TRK>;
+using FT3BuildTopologyDictionary = BuildTopologyDictionary<o2::detectors::DetID::FT3>;
+
+} // namespace o2::trkft3
+
+#endif

Detectors/Upgrades/ALICE3/TRKFT3/common/reconstruction/include/TRKReconstruction/TopologyDictionary.h

@@ -0,0 +1,123 @@
+// Copyright 2019-2026 CERN and copyright holders of ALICE O2.
+// See https://alice-o2.web.cern.ch/copyright for details of the copyright holders.
+// All rights not expressly granted are reserved.
+//
+// This software is distributed under the terms of the GNU General Public
+// License v3 (GPL Version 3), copied verbatim in the file "COPYING".
+//
+// In applying this license CERN does not waive the privileges and immunities
+// granted to it by virtue of its status as an Intergovernmental Organization
+// or submit itself to any jurisdiction.
+
+/// \file TopologyDictionary.h
+/// \brief Positions and errors of TRK and FT3 clusters per layer and pixel pattern
+///
+/// As the ITS's topology dictionary, measured from MC, but per layer: the
+/// layer's depth (the local y positions are taken at) and, per common pattern
+/// and per group of rare ones, the width (normalised median absolute
+/// deviation) and median of the residuals hit - centre of gravity across
+/// (local x) and along (local z). Every pattern finds an entry: its own, else
+/// its group's. On the VD the dictionary works in the flat frame of
+/// SegmentationChip::curvedToFlat; getClusterCoordinates returns O2's curved
+/// local coordinates.
+
+#ifndef ALICEO2_TRKFT3_TOPOLOGYDICTIONARY_H
+#define ALICEO2_TRKFT3_TOPOLOGYDICTIONARY_H
+
+#include "DataFormatsTRKFT3/Cluster.h"
+#include "DetectorsCommonDataFormats/DetID.h"
+#include "MathUtils/Cartesian.h"
+#include <Rtypes.h>
+#include <algorithm>
+#include <string>
+#include <unordered_map>
+#include <vector>
+
+namespace o2::trkft3
+{
+
+template <int DetID>
+class BuildTopologyDictionary;
+
+/// A common pattern, or the group of the rare patterns with the same span
+/// classes (spans 1 to 5, 6 or more) on both axes.
+struct DictionaryEntry {
+  std::vector<unsigned char> pattern; ///< row span, column span, pixel bits as the clusteriser streams them; empty for a group
+  float xCOG = 0.f;                   ///< centre of gravity from the reference pixel across [pitches]
+  float zCOG = 0.f;                   ///< along [pitches]
+  float xWidth = 0.f;                 ///< the residuals' width across [cm]
+  float zWidth = 0.f;                 ///< along [cm]
+  float xOffset = 0.f;                ///< the residuals' median across [cm]
+  float zOffset = 0.f;                ///< along [cm]
+  bool isGroup = false;
+
+  ClassDefNV(DictionaryEntry, 1);
+};
+
+struct LayerDictionary {
+  float depth = 0.f;                                   ///< the local y positions are taken at [cm]
+  std::vector<DictionaryEntry> entries;                ///< the common patterns, most frequent first, then the groups
+  std::unordered_multimap<unsigned long, int> hashMap; ///< itsmft::ClusterTopology hash -> common pattern's entry
+
+  ClassDefNV(LayerDictionary, 1);
+};
+
+template <int DetID>
+class TopologyDictionary
+{
+  static_assert(DetID == o2::detectors::DetID::TRK || DetID == o2::detectors::DetID::FT3, "only TRK and FT3 dictionaries are supported");
+
+ public:
+  using ClusterType = Cluster<DetID>;
+
+  static constexpr int NSpanClasses = 6;                      ///< spans 1 to 5, 6 or more
+  static constexpr int NGroups = NSpanClasses * NSpanClasses; ///< one group per pair of span classes, row class major
+
+  static constexpr int spanClass(int span) noexcept { return std::min(span, NSpanClasses) - 1; }
+  static constexpr int groupOf(int rowSpan, int colSpan) noexcept { return spanClass(rowSpan) * NSpanClasses + spanClass(colSpan); }
+
+  /// A cluster's layer: TRK's VD layers, then ML/OT (GeometryTGeo::getLayerTRK); FT3's discs. -1 for none (a VD disc).
+  static int layerOf(const ClusterType& cluster) noexcept;
+  /// A point from O2's local frame to the layer's flat frame (the VD's unrolled; elsewhere the same).
+  static math_utils::Point3D<float> localToFlat(const ClusterType& cluster, const math_utils::Point3D<float>& local) noexcept;
+  /// The cluster's centre of gravity in the flat frame at y = 0. \a pattern: row span, column span, pixel bits.
+  static math_utils::Point3D<float> centreOfGravity(const ClusterType& cluster, const unsigned char* pattern) noexcept;
+
+  [[nodiscard]] int getNumberOfLayers() const noexcept { return static_cast<int>(mLayers.size()); }
+  [[nodiscard]] const LayerDictionary& getLayer(int layer) const { return mLayers.at(layer); }
+  [[nodiscard]] const DictionaryEntry& getEntry(int layer, int id) const { return mLayers.at(layer).entries.at(id); }
+
+  /// The pattern's entry on the layer: its own if it is common, else its group's.
+  [[nodiscard]] int findID(int layer, const unsigned char* pattern) const;
+
+  /// The position in the flat frame: the entry's centre of gravity, plus its offsets if applied, at the layer's depth.
+  [[nodiscard]] math_utils::Point3D<float> getFlatCoordinates(const ClusterType& cluster, const unsigned char* pattern, int id) const;
+  /// The same in O2's local frame: curved on the VD.
+  [[nodiscard]] math_utils::Point3D<float> getClusterCoordinates(const ClusterType& cluster, const unsigned char* pattern, int id) const;
+  [[nodiscard]] math_utils::Point3D<float> getClusterCoordinates(const ClusterType& cluster, const unsigned char* pattern) const
+  {
+    return getClusterCoordinates(cluster, pattern, findID(layerOf(cluster), pattern));
+  }
+
+  [[nodiscard]] bool getApplyOffsets() const noexcept { return mApplyOffsets; }
+  void setApplyOffsets(bool apply) noexcept { mApplyOffsets = apply; }
+
+  void print() const;
+
+  static TopologyDictionary* loadFrom(const std::string& fileName, const std::string& objName = "ccdb_object");
+
+ private:
+  friend class BuildTopologyDictionary<DetID>;
+
+  std::vector<LayerDictionary> mLayers;
+  bool mApplyOffsets = false;
+
+  ClassDefNV(TopologyDictionary, 1);
+};
+
+using TRKTopologyDictionary = TopologyDictionary<o2::detectors::DetID::TRK>;
+using FT3TopologyDictionary = TopologyDictionary<o2::detectors::DetID::FT3>;
+
+} // namespace o2::trkft3
+
+#endif