package.json

{
  "name": "reactome-mcp",
  "version": "1.4.0",
  "description": "MCP server for Reactome pathway database - analysis, search, and exploration tools",
  "type": "module",
  "main": "dist/index.js",
  "bin": {
    "reactome-mcp": "dist/index.js",
    "reactome-mcp-http": "dist/http-server.js"
  },
  "files": [
    "dist/",
    "README.md",
    "LICENSE"
  ],
  "scripts": {
    "build": "node node_modules/typescript-7/bin/tsc",
    "prepare": "npm run build",
    "start": "node dist/index.js",
    "dev": "node node_modules/typescript-7/bin/tsc --watch",
    "typecheck": "node node_modules/typescript-7/bin/tsc --noEmit -p tsconfig.eslint.json",
    "test": "vitest run",
    "test:watch": "vitest",
    "inspect": "npx @modelcontextprotocol/inspector node dist/index.js",
    "demo": "node web/mcp-bridge.js",
    "demo:simple": "node web/server.js",
    "lint": "eslint .",
    "lint:fix": "eslint . --fix",
    "format": "prettier --write .",
    "format:check": "prettier --check .",
    "test:coverage": "vitest run --coverage",
    "sweep": "node scripts/sweep-live.mjs",
    "check": "npm run lint && npm run format:check && npm run typecheck && npm run typecheck:lint-compiler && npm run build && npm test",
    "typecheck:lint-compiler": "node node_modules/typescript/bin/tsc --noEmit -p tsconfig.eslint.json",
    "start:http": "node dist/http-server.js"
  },
  "keywords": [
    "mcp",
    "reactome",
    "pathway",
    "bioinformatics",
    "enrichment-analysis"
  ],
  "author": "",
  "license": "Apache-2.0",
  "dependencies": {
    "@modelcontextprotocol/sdk": "^1.30.0",
    "express": "^5.2.1",
    "zod": "^4.6.5"
  },
  "devDependencies": {
    "@eslint/js": "^10.0.1",
    "@types/express": "^5.0.6",
    "@types/node": "^26.6.1",
    "@vitest/coverage-v8": "^5.0.1",
    "eslint": "^10.10.0",
    "eslint-config-prettier": "^10.1.8",
    "prettier": "^3.9.8",
    "typescript": "^6.0.3",
    "typescript-7": "npm:typescript@^7.0.2",
    "typescript-eslint": "^8.70.0",
    "vitest": "^5.0.0"
  },
  "engines": {
    "node": ">=20.0.0"
  }
}