From 93e29305862e786ab0779f8052bf0760cf219428 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Mon, 10 Aug 2026 14:33:47 +0000 Subject: [PATCH] Bump biopython from 1.79 to 1.88 Bumps [biopython](https://github.com/biopython/biopython) from 1.79 to 1.88. - [Changelog](https://github.com/biopython/biopython/blob/master/NEWS.rst) - [Commits](https://github.com/biopython/biopython/commits) --- updated-dependencies: - dependency-name: biopython dependency-version: '1.88' dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index d961ba8..cd3df4d 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -47,7 +47,7 @@ dependencies = [ # --------- others --------- # "beartype", # runtime type checking "biopandas", # for biological dataframe parsing - "biopython==1.79", # for biological data parsing + "biopython==1.88", # for biological data parsing "ipykernel", # for running Jupyter notebooks "jaxtyping>=0.2.12", # tensor type checking "joblib", # for parallel processing